Stem-loop agr-mir-2h-1

Accession

MI0044842

Description

Acanthopleura granulata agr-mir-2h-1 precursor miRNA

Sequence

gcggagaagguagcuugugaacgucguggACGUCAAUGCUGGCAUGUAGUAGCcggcucguuagcucUAUCACAGCCAGCUUUGAUGAGCcaggaccuucaguuuucagcuuucauuaca
.....((((((......((((.(((.(((.((((((.((((((.(((.((((..((((....)))))))).))))))))).))))))..))).))).)))).......))))))......

Structure

-gcgga      -agcuug    c   g   -A      U      A   A    Cc    c 
      gaaggu       ugaa guc ugg  CGUCAA GCUGGC UGU GUAG  ggcu g
      ||||||       |||| ||| |||  |||||| |||||| ||| ||||  ||||  
      cuuucg       acuu cag acC  GUAGUU CGACCG ACA UAUc  ucga u
acauua      acuuuug    c   g   GA      U      -   C    --    u 

Annotation confidence Not enough data

Genome context

JABBOT010000080.1: 1397135-1397194 [+]

Clustered miRNAs

4 other miRNAs are < 10 kb from agr-mir-2h-1

Mature agr-miR-2h-1-5p

• Accession: MIMAT0068597
• Description: Acanthopleura granulata agr-miR-2h-1-5p mature miRNA
• Sequence: 30 - ACGUCAAUGCUGGCAUGUAGUAGC - 53
• Evidence: not_experimental

Mature agr-miR-2h-1-3p

• Accession: MIMAT0068596
• Description: Acanthopleura granulata agr-miR-2h-1-3p mature miRNA
• Sequence: 68 - UAUCACAGCCAGCUUUGAUGAGC - 90
• Evidence: not_experimental

References