Accession
MI0044881
Description
Ptychodera flava
pfl-mir-2001 precursor miRNA
Sequence
cccguuucuguauguaugugugucacgcugUUGUGACCGUUAUAAUGGGCAUCucaggacgcuaaggugccaaaaaaUGCCUAUUCUAACGUUCAUAAUAgcgugguauauggaaagcaccagacuaaca
...(((((((..(((..(((((((((((((((((((.(((((.(((((((((....((.(((....))))).....))))))))).))))).))))))))))))))))))).....))).))))..))).
...(((((((..(((..(((((((((((((((((((.(((((.(((((((((....((.(((....))))).....))))))))).))))).))))))))))))))))))).....))).))))..))).
Structure
ccc -- ua ---au C U -Cuca a u guu ucug ugu gugugucacgcugUUGUGA CGUUA AAUGGGCAU gg cgc a ||| |||| ||| ||||||||||||||||||| ||||| ||||||||| || ||| caa agac acg uauauggugcgAUAAUACU GCAAU UUAUCCGUa cc gug a --a uc -c aaagg U C aaaaa - g
Annotation confidence
Not enough data
Do you think this miRNA is real?
Genome context
LD368470.1: 38645-38714 [+]
Clustered miRNAs
2 other miRNAs are < 10 kb from pfl-mir-2001
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature pfl-miR-2001-5p
| Accession | MIMAT0068674 |
| Description | Ptychodera flava pfl-miR-2001-5p mature miRNA |
| Sequence | 31 - UUGUGACCGUUAUAAUGGGCAUC - 53 |
| Evidence | not_experimental |
Mature pfl-miR-2001-3p
| Accession | MIMAT0068675 |
| Description | Ptychodera flava pfl-miR-2001-3p mature miRNA |
| Sequence | 78 - UGCCUAUUCUAACGUUCAUAAUA - 100 |
| Evidence | not_experimental |
References
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