Accession
MI0044919
Description
Ptychodera flava
pfl-mir-100 precursor miRNA
Sequence
agguaacucagccgacugccagauugcuuaAACCCGUAGAUCCGAACUUGUGuuaggguucggcucgCAAGCUCGCAUCUAUGGGUCUAugucgucauggcaaaacacaccuggcugac
.......(((((((..((((((((.((.((.((((((((((.(((.((((((...((......)))))))).))).)))))))))).)).)).))).))))).........))))))).
.......(((((((..((((((((.((.((.((((((((((.(((.((((((...((......)))))))).))).)))))))))).)).)).))).))))).........))))))).
Structure
agguaac -------ac - u u A C A uua gu
ucagccg ugcca gau gc ua ACCCGUAGAU CGA CUUGUG gg u
||||||| ||||| ||| || || |||||||||| ||| |||||| ||
agucggu acggu cug ug AU UGGGUAUCUA GCU GAACgc uc c
------c ccacacaaa a c u C C C --- gg
Annotation confidence
Not enough data
Do you think this miRNA is real?
Genome context
LD349317.1: 44526-44584 []
Clustered miRNAs
1 other miRNA is < 10 kb from pfl-mir-100
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature pfl-miR-100-5p
| Accession | MIMAT0068749 |
| Description | Ptychodera flava pfl-miR-100-5p mature miRNA |
| Sequence | 31 - AACCCGUAGAUCCGAACUUGUG - 52 |
| Evidence | not_experimental |
Mature pfl-miR-100-3p
| Accession | MIMAT0068750 |
| Description | Ptychodera flava pfl-miR-100-3p mature miRNA |
| Sequence | 68 - CAAGCUCGCAUCUAUGGGUCUA - 89 |
| Evidence | not_experimental |
References
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