Stem-loop pfl-let-7

Accession

MI0044925

Description

Ptychodera flava pfl-let-7 precursor miRNA

Sequence

cgguaacuagguuguugccuacucucugggUGAGGUAGUAGGUUGUAUAGUUgagagcuauaccuuagggagauaaCUGUACAACUUGCUAACUUUCCcaggggugggagaaacacaccggucuggca
(((..(((.(((((((.(((((((.(((((.(((.((((((((((((((((((....(((.....))).....)))))))))))))))))).))).))))))))))))...)))).)))))))))...

Structure

---   ua   a   -    --g       u     U   G                  -agag   u 
   cgg  acu ggu uguu   ccuacuc cuggg GAG UAGUAGGUUGUAUAGUUg     cua a
   |||  ||| ||| ||||   ||||||| ||||| ||| ||||||||||||||||||     ||| c
   guc  ugg cca acaa   ggguggg gacCC UUC AUCGUUCAACAUGUCaau     gau c
acg   --   -   c    aga       -     U   A                  agagg   u 

Annotation confidence Not enough data

Genome context

LD349317.1: 35634-35701 []

Clustered miRNAs

1 other miRNA is < 10 kb from pfl-let-7

Mature pfl-let-7-5p

• Accession: MIMAT0068761
• Description: Ptychodera flava pfl-let-7-5p mature miRNA
• Sequence: 31 - UGAGGUAGUAGGUUGUAUAGUU - 52
• Evidence: not_experimental

Mature pfl-let-7-3p

• Accession: MIMAT0068762
• Description: Ptychodera flava pfl-let-7-3p mature miRNA
• Sequence: 77 - CUGUACAACUUGCUAACUUUCC - 98
• Evidence: not_experimental

References