miRBase entry: ebu-mir-216a

Stem-loop ebu-mir-216a


Accession
MI0045162
Description
Eptatretus burgeri ebu-mir-216a precursor miRNA


Sequence


cucugcaaagugguuggaccgcgcuccccgAAAUCUCUGCAGGCAACUGUGUGuaugcaugaugcucacuucuuggcaCACGUCGCCUGCAGGGGUUCCGaggugcgcggaaacgcgcggguaaacagaa
.((((....((((((...((((((.((.((.(((((((((((((.((.((((((...((.((........)).)))))))))).))))))))))))).)).)).)))))).))).))).......)))).

Structure
c    ---caaa   -   gga      u  c  A             A  U      aug  u  ugc 
 ucug       gug guu   ccgcgc cc cg AAUCUCUGCAGGC AC GUGUGu   ca ga   u
 ||||       ||| |||   |||||| || || ||||||||||||| || ||||||   || ||    
 agac       cgc caa   ggcgcg gg GC UUGGGGACGUCCG UG CACacg   gu cu   c
a    aaauggg   g   --a      u  a  C             C  -      ---  u  uca 


Annotation confidence Not enough data
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Genome context
FYBX02005270.1: 1704272-1704341 []
Clustered miRNAs
1 other miRNA is < 10 kb from ebu-mir-216a
Name Accession Chromosome Start End Strand Confidence




Database links

Mature ebu-miR-216a-5p

Accession MIMAT0069191
Description Eptatretus burgeri ebu-miR-216a-5p mature miRNA
Sequence 31 - AAAUCUCUGCAGGCAACUGUGUG - 53
Evidence not_experimental

Mature ebu-miR-216a-3p

Accession MIMAT0069192
Description Eptatretus burgeri ebu-miR-216a-3p mature miRNA
Sequence 79 - CACGUCGCCUGCAGGGGUUCCG - 100
Evidence not_experimental

References