miRBase entry: ebu-mir-133c

Stem-loop ebu-mir-133c


Accession
MI0045201
Description
Eptatretus burgeri ebu-mir-133c precursor miRNA


Sequence


cuggaguccucgagauaaaugcuuugcugaAGCUGGUAAAAUGGAACCAGAUCaacuacucaacggaUUUGGUCCCCUUCAACCAGCUAUagcugagcauuaaacgccucuggagcugca
.((.(((((..(((...(((((((.((((.(((((((..((.((.((((((((............)))))))).)).))..))))))).)))).)))))))......))).))).)).))

Structure
c  g  -   uc   ---aua       u    a       AA  U  A        aacua 
 ug ag ucc  gag      aaugcuu gcug AGCUGGU  AA GG ACCAGAUC     c
 || || |||  |||      ||||||| |||| |||||||  || || ||||||||      
 ac uc agg  cuc      uuacgag cgaU UCGACCA  UU CC UGGUUUag     u
-  g  g   -u   cgcaaa       u    A       AC  C  C        gcaac 


Annotation confidence Not enough data
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Genome context
FYBX02010313.1: 2320868-2320927 []
Clustered miRNAs
1 other miRNA is < 10 kb from ebu-mir-133c
Name Accession Chromosome Start End Strand Confidence




Database links

Mature ebu-miR-133c-5p

Accession MIMAT0069265
Description Eptatretus burgeri ebu-miR-133c-5p mature miRNA
Sequence 31 - AGCUGGUAAAAUGGAACCAGAUC - 53
Evidence not_experimental

Mature ebu-miR-133c-3p

Accession MIMAT0069264
Description Eptatretus burgeri ebu-miR-133c-3p mature miRNA
Sequence 68 - UUUGGUCCCCUUCAACCAGCUAU - 90
Evidence not_experimental

References