miRBase entry: ebu-mir-133b-1

Stem-loop ebu-mir-133b-1


Accession
MI0045202
Description
Eptatretus burgeri ebu-mir-133b-1 precursor miRNA


Sequence


aucaccgaccaucgccauggguuuugcuucAGCUGGUCCAGUGGAACCAAGUCgaccuuucuugggaUUUGGUCCCCUUCAACCAGCUGUggcguaaucccaauucggcauuucgagcca
.....(((.....(((.((((...((((.((((((((..((.((.((((((((..((......)))))))))).))))...)))))))).))))....))))....)))...))).....

Structure
aucac   ccauc   ---a    -uuu    u        -CC  U  A        ga  uu 
     cga     gcc    uggg    ugcu cAGCUGGU   AG GG ACCAAGUC  cc  u
     |||     |||    ||||    |||| ||||||||   || || ||||||||  ||   
     gcu     cgg    accc    gcgg GUCGACCA   UC CC UGGUUUag  gg  c
accga   --uua   cuua    uaau    U        ACU  -  C        --  uu 


Annotation confidence Not enough data
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Genome context
FYBX02009999.1: 892994-893053 []
Clustered miRNAs
1 other miRNA is < 10 kb from ebu-mir-133b-1
Name Accession Chromosome Start End Strand Confidence




Database links

Mature ebu-miR-133b-1-5p

Accession MIMAT0069267
Description Eptatretus burgeri ebu-miR-133b-1-5p mature miRNA
Sequence 31 - AGCUGGUCCAGUGGAACCAAGUC - 53
Evidence not_experimental

Mature ebu-miR-133b-1-3p

Accession MIMAT0069266
Description Eptatretus burgeri ebu-miR-133b-1-3p mature miRNA
Sequence 68 - UUUGGUCCCCUUCAACCAGCUGU - 90
Evidence not_experimental

References