miRBase entry: ebu-mir-30e

Stem-loop ebu-mir-30e


Accession
MI0045234
Description
Eptatretus burgeri ebu-mir-30e precursor miRNA


Sequence


gcaaaaggggaugguguuggguccaggugcUGUAAACACCCUACACUCUCAGCUggaauuaauguuagCUGGGAGGGGGUGUUUGCUGCaccuaccucaaacaaacaacugcuggucuc
.....((.((.((.((((((((..((((((.(((((((((((...(((((((((((........)))))))))))))))))))))).))))))))))..))))..)).)).))......

Structure
-gcaaa  g  a  -g    --    cc      U           ACA           aau 
      ag gg ug  uguu  gggu  aggugc GUAAACACCCU   CUCUCAGCUgg   u
      || || ||  ||||  ||||  |||||| |||||||||||   |||||||||||    
      uc uc ac  acaa  ucca  uccaCG CGUUUGUGGGG   GAGGGUCgauu   a
cucugg  g  a  aa    ac    --      U           ---           gua 


Annotation confidence Not enough data
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Genome context
FYBX02009227.1: 519900-519958 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from ebu-mir-30e
Name Accession Chromosome Start End Strand Confidence




Database links

Mature ebu-miR-30e-5p

Accession MIMAT0069324
Description Eptatretus burgeri ebu-miR-30e-5p mature miRNA
Sequence 31 - UGUAAACACCCUACACUCUCAGCU - 54
Evidence not_experimental

Mature ebu-miR-30e-3p

Accession MIMAT0069325
Description Eptatretus burgeri ebu-miR-30e-3p mature miRNA
Sequence 69 - CUGGGAGGGGGUGUUUGCUGC - 89
Evidence not_experimental

References