miRBase entry: ebu-mir-18

Stem-loop ebu-mir-18


Accession
MI0045258
Description
Eptatretus burgeri ebu-mir-18 precursor miRNA


Sequence


cgccgcagagcuuucgcggcuuccuuguguUAAGGUGCAUCUAGUGCAGAUAGuugcaaaguccauaaucuACUGCUCUACUUGCUCCUUCCGucacaagaagccacugagcccaggaugguc
.(((((.(.((((..(.((((((.(((((..((((.(((..(((.((((.(((................))))))).)))..))).))))....))))))))))).).)))).)..).)))).

Structure
c    - -a a    uc c      c     --uU    U   UC   U    A   uugcaaa 
 gccg c  g gcuu  g ggcuuc uugug    AAGG GCA  UAG GCAG UAG       g
 |||| |  | ||||  | |||||| |||||    |||| |||  ||| |||| |||        
 uggu g  c cgag  c ccgaag aacac    UUCC CGU  AUC CGUC Auc       u
c    a ga c    -u a      -     uGCC    U   UC   U    -   uaauacc 


Annotation confidence Not enough data
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Genome context
FYBX02010694.1: 1552447-1552509 [+]
Clustered miRNAs
6 other miRNAs are < 10 kb from ebu-mir-18
Name Accession Chromosome Start End Strand Confidence




Database links

Mature ebu-miR-18-5p

Accession MIMAT0069370
Description Eptatretus burgeri ebu-miR-18-5p mature miRNA
Sequence 31 - UAAGGUGCAUCUAGUGCAGAUAG - 53
Evidence not_experimental

Mature ebu-miR-18-3p

Accession MIMAT0069371
Description Eptatretus burgeri ebu-miR-18-3p mature miRNA
Sequence 72 - ACUGCUCUACUUGCUCCUUCCG - 93
Evidence not_experimental

References