miRBase entry: ebu-mir-100-1

Stem-loop ebu-mir-100-1


Accession
MI0045265
Description
Eptatretus burgeri ebu-mir-100-1 precursor miRNA


Sequence


gggagugagaccuuccagccgcccccuuacAACCCGUAGAUCCGAACUUGUGcucucuuccuggcugugCAAGGUCGUGCCUAUGGGUAGUguguggucggacaacgccuucuucuuguuc
(((((......)))))..(((.((.(.(((.((((((((...(((.(((((((..((.....))..))))))).)))...)))))))).))).).)).)))....................

Structure
--gggagugagaccuuccag   c  c u   A        AUC   A       uc  u 
                    ccg cc c uac ACCCGUAG   CGA CUUGUGc  uc u
                    ||| || | ||| ||||||||   ||| |||||||  || c
                    ggc gg g gUG UGGGUAUC   GCU GAACgug  gg c
cuuguucuucuuccgcaaca   u  u u   A        CGU   G       uc  u 


Annotation confidence Not enough data
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Genome context
FYBX02009032.1: 3776594-3776654 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from ebu-mir-100-1
Name Accession Chromosome Start End Strand Confidence




Database links

Mature ebu-miR-100-5p

Accession MIMAT0069382
Description Eptatretus burgeri ebu-miR-100-5p mature miRNA
Sequence 31 - AACCCGUAGAUCCGAACUUGUG - 52
Evidence not_experimental

Mature ebu-miR-100-1-3p

Accession MIMAT0069384
Description Eptatretus burgeri ebu-miR-100-1-3p mature miRNA
Sequence 70 - CAAGGUCGUGCCUAUGGGUAGU - 91
Evidence not_experimental

References