Stem-loop ebu-mir-200b

Accession

MI0045273

Description

Eptatretus burgeri ebu-mir-200b precursor miRNA

Sequence

aagucuggacuccacaagaugcuugaacaaCAUCUUACCUGGCAGUGCUGGAuguuuuguggaauucUAACACUGUCUGGUAAUGAUGUUccucgaguaauccuuauuccucugcagagu
.(.((((.(......(((.(((((((..(((((((((((.(((((((.((((.((((....)))))))).))))))).))))).))))))..)))))))...))).......).)))).)

Structure

a g    g -cuccac   --a       ac      -     U       C    u    u 
 a ucug a       aag   ugcuuga  aaCAUC UUACC GGCAGUG UGGA guuu g
 | |||| |       |||   |||||||  |||||| ||||| ||||||| |||| ||||  
 u agac u       uuc   augagcu  UUGUAG AAUGG CUGUCAC AUcu uaag u
- g    g cuccuua   cua       cc      U     U       A    -    g 

Annotation confidence Not enough data

Genome context

FYBX02010353.1: 2516084-2516143 []

Clustered miRNAs

2 other miRNAs are < 10 kb from ebu-mir-200b

Mature ebu-miR-200b-5p

• Accession: MIMAT0069395
• Description: Eptatretus burgeri ebu-miR-200b-5p mature miRNA
• Sequence: 31 - CAUCUUACCUGGCAGUGCUGGA - 52
• Evidence: not_experimental

Mature ebu-miR-200b-3p

• Accession: MIMAT0069394
• Description: Eptatretus burgeri ebu-miR-200b-3p mature miRNA
• Sequence: 68 - UAACACUGUCUGGUAAUGAUGUU - 90
• Evidence: not_experimental

References