miRBase entry: ebu-mir-1b-1

Stem-loop ebu-mir-1b-1


Accession
MI0045281
Description
Eptatretus burgeri ebu-mir-1b-1 precursor miRNA


Sequence


cagaauucugcacgaaaccauccugaagacACGUGCUUCUUUACAGAACCACAugccgugcucguagugUGGAAUGUAAAGAAGUAUGUGUuuaggguuggagugacguuuggagaugaaa
......(((.((((...(((.(((..(((((((((((((((((((...((((((..((....))..))))))..))))))))))))))))))).))).))).....)))..).))).....

Structure
cagaau   g --   --aaa   u   ga                   GAA      gc  u 
      ucu c  acg     cca ccu  agacACGUGCUUCUUUACA   CCACAu  cg g
      ||| |  |||     ||| |||  |||||||||||||||||||   ||||||  ||  
      aga g  ugc     ggu ggg  uuUGUGUAUGAAGAAAUGU   GGUgug  gc c
-aaagu   g uu   aguga   u   -a                   -AA      au  u 


Annotation confidence Not enough data
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Genome context
FYBX02009999.1: 893816-893876 []
Clustered miRNAs
1 other miRNA is < 10 kb from ebu-mir-1b-1
Name Accession Chromosome Start End Strand Confidence




Database links

Mature ebu-miR-1b-1-5p

Accession MIMAT0069411
Description Eptatretus burgeri ebu-miR-1b-1-5p mature miRNA
Sequence 31 - ACGUGCUUCUUUACAGAACCACA - 53
Evidence not_experimental

Mature ebu-miR-1b-1-3p

Accession MIMAT0069410
Description Eptatretus burgeri ebu-miR-1b-1-3p mature miRNA
Sequence 70 - UGGAAUGUAAAGAAGUAUGUGU - 91
Evidence not_experimental

References