miRBase entry: gja-mir-338

Stem-loop gja-mir-338


Accession
MI0045320
Description
Gekko japonicus gja-mir-338 precursor miRNA


Sequence


cgcuucuuuuaccaauugcuccucuuccccAACAAUAUCCUGGUGCUGAGUgaguggcccucagagacUCCAGCAUCAGUGAUUUUGUUGAagagggugagcgcucucgucugaugaagaa
..((((.((.((....(((((.(((((..((((((.(((((((((((((((...((.....))...))).))))))))).))).))))))..))))).))))).....))..)).))))..

Structure
cg    u  -u  -caau     c     cc      U   -         -   gag  g 
  cuuc uu  ac     ugcuc ucuuc  cAACAA AUC CUGGUGCUG AGU   ug c
  |||| ||  ||     ||||| |||||  |||||| ||| ||||||||| |||   || c
  gaag ag  ug     gcgag gggag  GUUGUU UAG GACUACGAC Uca   ac c
aa    u  uc  cucuc     u     aA      U   U         C   gag  u 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
NW_015160208.1: 1494395-1494455 [+]

Database links

Mature gja-miR-338-5p

Accession MIMAT0069488
Description Gekko japonicus gja-miR-338-5p mature miRNA
Sequence 31 - AACAAUAUCCUGGUGCUGAGU - 51
Evidence not_experimental

Mature gja-miR-338-3p

Accession MIMAT0069487
Description Gekko japonicus gja-miR-338-3p mature miRNA
Sequence 69 - UCCAGCAUCAGUGAUUUUGUUGA - 91
Evidence not_experimental

References