miRBase entry: gja-mir-214

Stem-loop gja-mir-214


Accession
MI0045332
Description
Gekko japonicus gja-mir-214 precursor miRNA


Sequence


ggggcuggcuggacagaguugucacgugucUGCCUGUCUACACUUGCUGUGCagaacauccucucaccuguACAGCAGGCACAGACAGGCAGUcacaugacaacccagccugagagaccacca
((((((((((((.....(((((((.(((.((((((((((...((((((((((((.............))))))))))))...)))))))))).))).)))))))))))))....)).)).)).

Structure
-  -  -  ----      acaga       c   u          ACA            aacau 
 gg gg cu    ggcugg     guuguca gug cUGCCUGUCU   CUUGCUGUGCag     c
 || || ||    ||||||     ||||||| ||| ||||||||||   ||||||||||||     c
 cc cc ga    ccgacc     caacagu cac GACGGACAGA   GGACGACAuguc     u
a  a  a  gagu      -----       a   U          CAC            cacuc 


Annotation confidence Not enough data
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Genome context
NW_015163693.1: 17069-17131 []
Clustered miRNAs
1 other miRNA is < 10 kb from gja-mir-214
Name Accession Chromosome Start End Strand Confidence




Database links

Mature gja-miR-214-5p

Accession MIMAT0069511
Description Gekko japonicus gja-miR-214-5p mature miRNA
Sequence 31 - UGCCUGUCUACACUUGCUGUGC - 52
Evidence not_experimental

Mature gja-miR-214-3p

Accession MIMAT0069510
Description Gekko japonicus gja-miR-214-3p mature miRNA
Sequence 72 - ACAGCAGGCACAGACAGGCAGU - 93
Evidence not_experimental

References