Stem-loop gja-mir-196a-1

Accession

MI0045345

Description

Gekko japonicus gja-mir-196a-1 precursor miRNA

Sequence

aaauaggcggcugagaacuggucggugauuUAGGUAGUUUCAUGUUGUUGGGgcuggagcucucucucucucUACAGCACGAAACUGCCCGAAuuacuucaguuuguacucaucaagcggguc
......((.(.((((((((((..((((((((.(((((((((.((((((.((((..((((....))))..)))))))))).))))))))).))))))))))))))....)))).)..)).....

Structure

aaauag  -g c    ----      uc        A         A      U    cu    c 
      gc  g ugag    aacugg  ggugauuU GGUAGUUUC UGUUGU GGGg  ggag u
      ||  | ||||    ||||||  |||||||| ||||||||| |||||| ||||  ||||  
      cg  c acuc    uugacu  ucauuAAG CCGUCAAAG ACGACA Ucuc  ucuc c
-cuggg  aa u    augu      --        C         C      -    uc    u 

Annotation confidence Not enough data

Genome context

NW_015170898.1: 1224278-1224340 []

Mature gja-miR-196a-1-5p

• Accession: MIMAT0069535
• Description: Gekko japonicus gja-miR-196a-1-5p mature miRNA
• Sequence: 31 - UAGGUAGUUUCAUGUUGUUGGG - 52
• Evidence: not_experimental

Mature gja-miR-196a-1-3p

• Accession: MIMAT0069536
• Description: Gekko japonicus gja-miR-196a-1-3p mature miRNA
• Sequence: 73 - UACAGCACGAAACUGCCCGAA - 93
• Evidence: not_experimental

References