miRBase entry: gja-mir-194b

Stem-loop gja-mir-194b


Accession
MI0045346
Description
Gekko japonicus gja-mir-194b precursor miRNA


Sequence


ugccccugcccagacugggugccuaucaacUGUAACAGCAACUCCAUGUGGAAgcaucaguccauuCCAGUGGGGGGGCUGUUAUUUUggaugggcaccuaaaagguguuggagggca
(((((((((((....((((((((((((....((((((((..((((((.(((((...........)))))))))))..))))))))....))))))))))))...)).).))).)))))

Structure
     -   - -  agac            aacU        AA      G     gcau 
ugccc cug c cc    ugggugccuauc    GUAACAGC  CUCCAU UGGAA    c
||||| ||| | ||    ||||||||||||    ||||||||  |||||| |||||    a
acggg ggu g gg    auccacggguag    UAUUGUCG  GGGGUG ACCuu    g
     a   u u  -aaa            gUUU        GG      -     accu 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
NW_015165831.1: 1123408-1123465 []
Clustered miRNAs
1 other miRNA is < 10 kb from gja-mir-194b
Name Accession Chromosome Start End Strand Confidence




Database links

Mature gja-miR-194b-5p

Accession MIMAT0069537
Description Gekko japonicus gja-miR-194b-5p mature miRNA
Sequence 31 - UGUAACAGCAACUCCAUGUGGAA - 53
Evidence not_experimental

Mature gja-miR-194b-3p

Accession MIMAT0069538
Description Gekko japonicus gja-miR-194b-3p mature miRNA
Sequence 67 - CCAGUGGGGGGGCUGUUAUUUU - 88
Evidence not_experimental

References