miRBase entry: gja-mir-181b-1

Stem-loop gja-mir-181b-1


Accession
MI0045358
Description
Gekko japonicus gja-mir-181b-1 precursor miRNA


Sequence


cuucauacaccacaaaaaaaggucacaaucAACAUUCAUUGCUGUCGGUGGGUUuaacuauguggacaagCUCACUGAACAAUGAAUGCAACuguggccccacuuuuuacaaucacgguca
....................(((((((.....(((((((((...(((((((((((..((....))..))))))))))).)))))))))....)))))))......................

Structure
--cuucauacaccacaaaaaaa       aucAA         CUG           aa  a 
                      ggucaca     CAUUCAUUG   UCGGUGGGUUu  cu u
                      |||||||     |||||||||   |||||||||||  ||  
                      ccggugu     GUAAGUAAC   AGUCACUCgaa  gg g
acuggcacuaacauuuuucacc       -CAAC         --A           ca  u 


Annotation confidence Not enough data
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Genome context
NW_015169787.1: 910004-910064 []
Clustered miRNAs
1 other miRNA is < 10 kb from gja-mir-181b-1
Name Accession Chromosome Start End Strand Confidence




Database links

Mature gja-miR-181b-5p

Accession MIMAT0069559
Description Gekko japonicus gja-miR-181b-5p mature miRNA
Sequence 31 - AACAUUCAUUGCUGUCGGUGGGUU - 54
Evidence not_experimental

Mature gja-miR-181b-1-3p

Accession MIMAT0069561
Description Gekko japonicus gja-miR-181b-1-3p mature miRNA
Sequence 71 - CUCACUGAACAAUGAAUGCAAC - 92
Evidence not_experimental

References