miRBase entry: gja-mir-181a-1

Stem-loop gja-mir-181a-1


Accession
MI0045361
Description
Gekko japonicus gja-mir-181a-1 precursor miRNA


Sequence


gaauucuucuuucuugugguugcuucagugAACAUUCAACGCUGUCGGUGAGUuugggauuaaagugaaaaCCAUCGACCGUUGAUUGUACCcuccagcuaaccauccuccuccuccuccuu
...............(((((((((..((.(.(((.((((((..(((((((.((((.............))))))))))))))))).))).).))..))).))))))................

Structure
-gaauucuucuuucuu      -   uc  u A   U      CU       A    gggau 
                gugguu gcu  ag g ACA UCAACG  GUCGGUG GUuu     u
                |||||| |||  || | ||| ||||||  ||||||| ||||     a
                uaccaa cga  uc C UGU AGUUGC  CAGCUAC Caaa     a
uuccuccuccuccucc      u   cc  C A   U      --       -    aguga 


Annotation confidence Not enough data
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Genome context
NW_015169787.1: 910201-910262 []
Clustered miRNAs
1 other miRNA is < 10 kb from gja-mir-181a-1
Name Accession Chromosome Start End Strand Confidence




Database links

Mature gja-miR-181a-5p

Accession MIMAT0069562
Description Gekko japonicus gja-miR-181a-5p mature miRNA
Sequence 31 - AACAUUCAACGCUGUCGGUGAGU - 53
Evidence not_experimental

Mature gja-miR-181a-1-3p

Accession MIMAT0069565
Description Gekko japonicus gja-miR-181a-1-3p mature miRNA
Sequence 72 - CCAUCGACCGUUGAUUGUACC - 92
Evidence not_experimental

References