Stem-loop gja-mir-133b

Accession

MI0045387

Description

Gekko japonicus gja-mir-133b precursor miRNA

Sequence

cacaccggacagaagcugcaggcugcucugGCUGGUCAAAUGGAACCAAGGCcgucuuccugggaggUUUGGUCCCCUUCAACCAGCUAcagcagcguugcgauuggucaucugcacaa
......(..((((.(((((((((((((.((((((((..((.((.((((((.((.(((....))).)))))))).)).))..)))))))).)))))).))))....)))..))))..)..

Structure

cacacc ga    -a   ----    -      c        CA  U  A      G  g   u 
      g  caga  gcu    gcag gcugcu ugGCUGGU  AA GG ACCAAG Cc ucu c
      |  ||||  |||    |||| |||||| ||||||||  || || |||||| || |||  
      c  gucu  ugg    cguu cgacga AUCGACCA  UU CC UGGUUU gg ggg c
----aa ac    ac   uuag    g      c        AC  C  C      -  a   u 

Annotation confidence Not enough data

Genome context

NW_015174362.1: 27171-27229 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from gja-mir-133b

Mature gja-miR-133b-5p

• Accession: MIMAT0069611
• Description: Gekko japonicus gja-miR-133b-5p mature miRNA
• Sequence: 31 - GCUGGUCAAAUGGAACCAAGGC - 52
• Evidence: not_experimental

Mature gja-miR-133b-3p

• Accession: MIMAT0069610
• Description: Gekko japonicus gja-miR-133b-3p mature miRNA
• Sequence: 68 - UUUGGUCCCCUUCAACCAGCUA - 89
• Evidence: not_experimental

References