miRBase entry: gja-mir-130b

Stem-loop gja-mir-130b


Accession
MI0045395
Description
Gekko japonicus gja-mir-130b precursor miRNA


Sequence


cuucuggauggcgagaagcgucuguccacuGCCCUUUUUGUGUUGUACUACUagcaaaccugcacaaaaagCAGUGCAAUGUUAAAAGGGCAUuggccagcaaugcuguucgccucacugcau
......((.((((((.((((((((.(((.(((((((((..(((((((((.((.(((....)))......)).)))))))))..))))))))).))).)))..))))).)))))))).......

Structure
-cuucug  u      a     --   u   c         UG         A  -----a   a 
       ga ggcgag agcgu  cug cca uGCCCUUUU  UGUUGUACU CU      gca a
       || |||||| |||||  ||| ||| |||||||||  ||||||||| ||      |||  
       cu ccgcuu ucgua  gac ggu ACGGGAAAA  GUAACGUGA ga      cgu c
uacguca  -      g     ac   c   U         UU         C  aaaaca   c 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
NW_015174315.1: 144022-144084 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from gja-mir-130b
Name Accession Chromosome Start End Strand Confidence




Database links

Mature gja-miR-130b-5p

Accession MIMAT0069625
Description Gekko japonicus gja-miR-130b-5p mature miRNA
Sequence 31 - GCCCUUUUUGUGUUGUACUACU - 52
Evidence not_experimental

Mature gja-miR-130b-3p

Accession MIMAT0069624
Description Gekko japonicus gja-miR-130b-3p mature miRNA
Sequence 72 - CAGUGCAAUGUUAAAAGGGCAU - 93
Evidence not_experimental

References