miRBase entry: gja-mir-23b

Stem-loop gja-mir-23b


Accession
MI0045450
Description
Gekko japonicus gja-mir-23b precursor miRNA


Sequence


augucucucccuuccccgccacugccugcCGGGGUUCCUGGUGAUGGGAUUUuauccucaugcgcagaAUCACAUUGCCAGGGAUUUCCAAcggucggugagccgccacgugcggauggag
......((((..(((.((((((((((....((((((((((((((((.((((((...(....)...)))))).))))))))))))))))....)).))))).........))).))).))))

Structure
augucu    cu   c   ---------     -  ugcC                G      auc u 
      cucc  ucc cgc         cacug cc    GGGGUUCCUGGUGAUG GAUUUu   c c
      ||||  ||| |||         ||||| ||    |||||||||||||||| ||||||   |  
      gagg  agg gug         guggc gg    CUUUAGGGACCGUUAC CUAaga   g a
------    -u   c   caccgccga     u  cAAC                A      cgc u 


Annotation confidence Not enough data
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Genome context
NW_015175453.1: 136216-136276 []
Clustered miRNAs
2 other miRNAs are < 10 kb from gja-mir-23b
Name Accession Chromosome Start End Strand Confidence




Database links

Mature gja-miR-23b-5p

Accession MIMAT0069717
Description Gekko japonicus gja-miR-23b-5p mature miRNA
Sequence 30 - CGGGGUUCCUGGUGAUGGGAUUU - 52
Evidence not_experimental

Mature gja-miR-23b-3p

Accession MIMAT0069716
Description Gekko japonicus gja-miR-23b-3p mature miRNA
Sequence 69 - AUCACAUUGCCAGGGAUUUCCAA - 91
Evidence not_experimental

References