miRBase entry: gja-mir-17c

Stem-loop gja-mir-17c


Accession
MI0045457
Description
Gekko japonicus gja-mir-17c precursor miRNA


Sequence


uucgucauacuugccuuguccuugcaguagCAAAGUGCUCAUAGUGCAGGUAGuuguucacccaaaucuACUGUAAUAUGGGCACUUACAGuacugcuggauccaaaagcaccuugcugucc
.................((((..((((((...(((((((((((.(((((.((((((......)))..)))))))).)))))))))))....)))))).)))).....((((...))))....

Structure
---uucgucauacuugccuu    uu      -gCA           G     G   --   uu 
                    gucc  gcagua    AAGUGCUCAUA UGCAG UAG  uug  c
                    ||||  ||||||    ||||||||||| ||||| |||  |||   
                    uagg  cgucau    UUCACGGGUAU AUGUC Auc  aac  a
ccugucguuccacgaaaacc    -u      GACA           A     -   ua   cc 


Annotation confidence Not enough data
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Genome context
NW_015169856.1: 119534-119595 []
Clustered miRNAs
3 other miRNAs are < 10 kb from gja-mir-17c
Name Accession Chromosome Start End Strand Confidence




Database links

Mature gja-miR-17c-5p

Accession MIMAT0069729
Description Gekko japonicus gja-miR-17c-5p mature miRNA
Sequence 31 - CAAAGUGCUCAUAGUGCAGGUAG - 53
Evidence not_experimental

Mature gja-miR-17c-3p

Accession MIMAT0069730
Description Gekko japonicus gja-miR-17c-3p mature miRNA
Sequence 70 - ACUGUAAUAUGGGCACUUACAG - 91
Evidence not_experimental

References