miRBase entry: gja-mir-18

Stem-loop gja-mir-18


Accession
MI0045459
Description
Gekko japonicus gja-mir-18 precursor miRNA


Sequence


cguagugugguguuuuaaugcuuuuuguucUAAGGUGCAUCUAGUGCAGAUAGugaaguagacuagcaucuACUGCCCUAAGUGCUCCUUCUGGCauaagaaguuguauuuucauccagucacuc
...(((((((((.......(((((((((.((((((.((((.(((.((((.(((((...........)).))))))).))).)))).)))..))).)))))))))........)).)))..)))).

Structure
cgu    --   -  -uuuuaau         u   --   U    C   U    A   -  aagu 
   agug  ugg ug        gcuuuuugu cUA  AGG GCAU UAG GCAG UAG ug    a
   ||||  ||| ||        ||||||||| |||  ||| |||| ||| |||| ||| ||    g
   ucac  acc ac        ugaagaaua GGU  UCC CGUG AUC CGUC Auc ac    a
--c    ug   u  uuuuaugu         C   CU   U    A   C    -   u  gauc 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
NW_015159750.1: 119955-120019 []
Clustered miRNAs
5 other miRNAs are < 10 kb from gja-mir-18
Name Accession Chromosome Start End Strand Confidence




Database links

Mature gja-miR-18-5p

Accession MIMAT0069733
Description Gekko japonicus gja-miR-18-5p mature miRNA
Sequence 31 - UAAGGUGCAUCUAGUGCAGAUAG - 53
Evidence not_experimental

Mature gja-miR-18-3p

Accession MIMAT0069734
Description Gekko japonicus gja-miR-18-3p mature miRNA
Sequence 72 - ACUGCCCUAAGUGCUCCUUCUGGC - 95
Evidence not_experimental

References