miRBase entry: gja-mir-16b

Stem-loop gja-mir-16b


Accession
MI0045462
Description
Gekko japonicus gja-mir-16b precursor miRNA


Sequence


aguagaacaauuguuauacuuguuccgcccUAGCAGCACGUAAAUAUUGGUGuaguaaagauaaucuuaacaCCAAUAUUAUUGUGCUGCUUAAgcguggcagggauuaagcaacacuuacuuu
(((((.....(((((...((((((.(((...(((((((((..(((((((((((....((((...)))).)))))))))))..)))))))))...))).)))))).....)))))...)))))..

Structure
--     aacaa     --aua      c   ccU         UA           agua    u 
  aguag     uuguu     cuuguu cgc   AGCAGCACG  AAUAUUGGUGu    aaga  
  |||||     |||||     |||||| |||   |||||||||  |||||||||||    |||| a
  ucauu     aacga     ggacgg gcg   UCGUCGUGU  UUAUAACCaca    uucu  
uu     --cac     auuag      u   AAU         UA           ---a    a 


Annotation confidence Not enough data
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Genome context
NW_015163604.1: 1350585-1350648 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from gja-mir-16b
Name Accession Chromosome Start End Strand Confidence




Database links

Mature gja-miR-16b-5p

Accession MIMAT0069739
Description Gekko japonicus gja-miR-16b-5p mature miRNA
Sequence 31 - UAGCAGCACGUAAAUAUUGGUG - 52
Evidence not_experimental

Mature gja-miR-16b-3p

Accession MIMAT0069740
Description Gekko japonicus gja-miR-16b-3p mature miRNA
Sequence 73 - CCAAUAUUAUUGUGCUGCUUAA - 94
Evidence not_experimental

References