miRBase entry: gja-mir-16a

Stem-loop gja-mir-16a


Accession
MI0045463
Description
Gekko japonicus gja-mir-16a precursor miRNA


Sequence


uggcauagguuccuggugucagcugugcccUAGCAGCACAAAAAUAUUGGGAGuuauucuuagucaagugccUCCAAUAUUGACUGUGCUGCUGAAguaaggcugauuauucuuccacaagucucu
.(((...((........(((((((.(((..((((((((((..((((((((.((.((((........)))).))))))))))...))))))))))..))).))))))).......))....)))...

Structure
--u   -aua  uuccuggu       g   cc          -AA        G  u    cuu 
   ggc    gg        gucagcu ugc  UAGCAGCACA   AAUAUUGG AG uauu   a
   |||    ||        ||||||| |||  ||||||||||   |||||||| || ||||    
   cug    cc        uagucgg aug  GUCGUCGUGU   UUAUAACC Uc guga   g
ucu   aaca  -uucuuau       a   AA          CAG        -  c    acu 


Annotation confidence Not enough data
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Genome context
NW_015176538.1: 29243-29308 []
Clustered miRNAs
1 other miRNA is < 10 kb from gja-mir-16a
Name Accession Chromosome Start End Strand Confidence




Database links

Mature gja-miR-16a-5p

Accession MIMAT0069741
Description Gekko japonicus gja-miR-16a-5p mature miRNA
Sequence 31 - UAGCAGCACAAAAAUAUUGGGAG - 53
Evidence not_experimental

Mature gja-miR-16a-3p

Accession MIMAT0069742
Description Gekko japonicus gja-miR-16a-3p mature miRNA
Sequence 73 - UCCAAUAUUGACUGUGCUGCUGAA - 96
Evidence not_experimental

References