miRBase entry: gja-mir-99a

Stem-loop gja-mir-99a


Accession
MI0045472
Description
Gekko japonicus gja-mir-99a precursor miRNA


Sequence


accccuuugcggccguugccaguugccauaAACCCGUAGAUCCGAACUUGCGguacagcuuccucacaCAAGCUCGAGUCUGUGGGUAUGugucgaucuuggccaggacguccugccgcu
........(((((((((((((((((.((((.((((((((((.(((.((((.(..............).)))).))).)))))))))).)))).))))..))))...))))....))))).

Structure
accccuuu     ----    ---    --    c    A          C   A    C guacag 
        gcggc    cguu   gcca  guug caua ACCCGUAGAU CGA CUUG G      c
        |||||    ||||   ||||  |||| |||| |||||||||| ||| |||| |       
        cgccg    gcag   cggu  uagc guGU UGGGUGUCUG GCU GAAC c      u
-------u     uccu    gac    uc    u    A          A   C    a acuccu 


Annotation confidence Not enough data
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Genome context
NW_015177027.1: 781795-781854 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from gja-mir-99a
Name Accession Chromosome Start End Strand Confidence




Database links

Mature gja-miR-99a-5p

Accession MIMAT0069758
Description Gekko japonicus gja-miR-99a-5p mature miRNA
Sequence 31 - AACCCGUAGAUCCGAACUUGCG - 52
Evidence not_experimental

Mature gja-miR-99a-3p

Accession MIMAT0069759
Description Gekko japonicus gja-miR-99a-3p mature miRNA
Sequence 69 - CAAGCUCGAGUCUGUGGGUAUG - 90
Evidence not_experimental

References