miRBase entry: mal-mir-19c

Stem-loop mal-mir-19c


Accession
MI0045717
Description
Monopterus albus mal-mir-19c precursor miRNA


Sequence


auauuguaagaggcuuuucugacccuggccAGCUUUGCAGGGUGGGCAGUCAGCcugugugcguuaggagcagcUGUGCAAACCCAUGCAAAACUGAccauggcuggaguugucaucaguauauuuu
((((((.....(((..(((((.((.(((.(((.((((((((((..(((..((((.(((...(....)..))))))))))..)))).)))))).))).))).)).)))))..)))..)))))).....

Structure
-----      uaaga   uu     a  c   c   C      -    GG   GU    c   gug g 
     auauug     ggc  uucug cc ugg cAG UUUGCA GGGU  GCA  CAGC ugu   c u
     ||||||     |||  ||||| || ||| ||| |||||| ||||  |||  |||| |||   |  
     uaugac     cug  gaggu gg acc GUC AAACGU CCCA  CGU  GUcg acg   g u
uuuua      ---ua   uu     c  u   A   A      A    AA   --    -   -ag a 


Annotation confidence Not enough data
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Genome context
KV885025.1: 88524-88590 [+]
Clustered miRNAs
3 other miRNAs are < 10 kb from mal-mir-19c
Name Accession Chromosome Start End Strand Confidence




Database links

Mature mal-miR-19c-5p

Accession MIMAT0070153
Description Monopterus albus mal-miR-19c-5p mature miRNA
Sequence 31 - AGCUUUGCAGGGUGGGCAGUCAGC - 54
Evidence not_experimental

Mature mal-miR-19c-3p

Accession MIMAT0070152
Description Monopterus albus mal-miR-19c-3p mature miRNA
Sequence 75 - UGUGCAAACCCAUGCAAAACUGA - 97
Evidence not_experimental

References