miRBase entry: mal-mir-200b

Stem-loop mal-mir-200b


Accession
MI0045754
Description
Monopterus albus mal-mir-200b precursor miRNA


Sequence


ugagcagugacagaaguggcucucaggaucCAUCUUACCCGACAGUGCUGGAuuguacgacuguuguucUAACACUGUCUGGUAACGAUGUUuucuggguggcucuguggucuccugugucg
.((((((.(((...((.(((((((((((..(((((((((.(((((((.((((....((....))...)))).))))))).))))).))))..))))))).))))))...)))..)))).)).

Structure
u  -    -u   aga  u    -       uc    -     C       C    uugu  g 
 ga gcag  gac   ag ggcu cucagga  CAUC UUACC GACAGUG UGGA    ac a
 || ||||  |||   || |||| |||||||  |||| ||||| ||||||| ||||    ||  
 cu uguc  cug   uc ucgg gggucuu  GUAG AAUGG CUGUCAC AUcu    ug c
g  g    cu   gug  -    u       UU    C     U       A    -ugu  u 


Annotation confidence Not enough data
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Genome context
KV884814.1: 2520120-2520181 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from mal-mir-200b
Name Accession Chromosome Start End Strand Confidence




Database links

Mature mal-miR-200b-5p

Accession MIMAT0070211
Description Monopterus albus mal-miR-200b-5p mature miRNA
Sequence 31 - CAUCUUACCCGACAGUGCUGGA - 52
Evidence not_experimental

Mature mal-miR-200b-3p

Accession MIMAT0070210
Description Monopterus albus mal-miR-200b-3p mature miRNA
Sequence 70 - UAACACUGUCUGGUAACGAUGUU - 92
Evidence not_experimental

References