Accession
MI0045814
Description
Lepisosteus oculatus
loc-mir-1175 precursor miRNA
Sequence
cuaaaagaugggaagccccacuugaaucgaACCUCGACUUUAGCACUGUUCUugguaugauauuagAAAGUGCUACCAAGUGGAGGUGUgaucugguguuguaauuggcuuggcuaugg
.......((((.(((((.((((.((.(((.(((((.(((((((((((.((((.((((...)))))))))))))))..)))).))))).))))).))))........)))))..))))..
.......((((.(((((.((((.((.(((.(((((.(((((((((((.((((.((((...)))))))))))))))..)))).))))).))))).))))........)))))..))))..
Structure
cuaaaag -g -------c u a a G -- G u u
augg aagcc cacu ga ucg ACCUC ACUU UAGCACU UUCU ggua
|||| ||||| |||| || ||| ||||| |||| ||||||| |||| |||| g
uauc uucgg gugg cu agU UGGAG UGAA AUCGUGA AAga uuau
-----gg gg uuaauguu u - G G CC - - a
Annotation confidence
Not enough data
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Genome context
LG7: 14528223-14528281 []
Clustered miRNAs
1 other miRNA is < 10 kb from loc-mir-1175
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature loc-miR-1175-5p
| Accession | MIMAT0070313 |
| Description | Lepisosteus oculatus loc-miR-1175-5p mature miRNA |
| Sequence | 31 - ACCUCGACUUUAGCACUGUUCU - 52 |
| Evidence | not_experimental |
Mature loc-miR-1175-3p
| Accession | MIMAT0070312 |
| Description | Lepisosteus oculatus loc-miR-1175-3p mature miRNA |
| Sequence | 67 - AAAGUGCUACCAAGUGGAGGUGU - 89 |
| Evidence | not_experimental |
References
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