miRBase entry: loc-mir-338-1

Stem-loop loc-mir-338-1


Accession
MI0045819
Description
Lepisosteus oculatus loc-mir-338-1 precursor miRNA


Sequence


uccugcgcccccagcguauuccucucuggaAACAAUAUCCUGAUGCUGAACGAGUguguugggaaaagcUCCAGCAUCAGUGAUUUUGUUGCuagcgggagaauggaaucggcagagcagga
(((((((((.....(((.((((.(.((((.(((((.((((((((((((...((((............))))))))))))).))).))))).)))).))))).))).....)))...))))))

Structure
      ---   cccag   a    u u    a     U   -         AAC    guguu 
uccugc   gcc     cgu uucc c cugg AACAA AUC CUGAUGCUG   GAGU     g
||||||   |||     ||| |||| | |||| ||||| ||| |||||||||   ||||      
aggacg   cgg     gua gagg g gauC UUGUU UAG GACUACGAC   CUcg     g
      aga   cuaag   a    - c    G     U   U         ---    aaaag 


Annotation confidence Not enough data
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Genome context
LG13: 15505409-15505470 [+]

Database links

Mature loc-miR-338-1-5p

Accession MIMAT0070322
Description Lepisosteus oculatus loc-miR-338-1-5p mature miRNA
Sequence 31 - AACAAUAUCCUGAUGCUGAACGAGU - 55
Evidence not_experimental

Mature loc-miR-338-3p

Accession MIMAT0070320
Description Lepisosteus oculatus loc-miR-338-3p mature miRNA
Sequence 70 - UCCAGCAUCAGUGAUUUUGUUGC - 92
Evidence not_experimental

References