Accession
MI0045842
Description
Lepisosteus oculatus
loc-mir-199-1 precursor miRNA
Sequence
aggaggaagaggaggguccugcuccgucguCCCAGUGUUCAGACUACCUGUUCaggaugauacugguguACAGUAGUCUGCACAUUGGUUAgacugugcaaggaagagcuccaaggacgua
..........((((..((((((.(.(((...(((((((.((((((((.(((((((.......))))...))))))))))).)))))))...))).).)).))))....)))).........
..........((((..((((((.(.(((...(((((((.((((((((.(((((((.......))))...))))))))))).)))))))...))).).)).))))....)))).........
Structure
aggaggaaga --gg - u c guC U C --- ga
ggag uccu gc c guc CCAGUGU CAGACUAC UGU UCag u
|||| |||| || | ||| ||||||| |||||||| ||| |||| g
ccuc agga cg g cag GGUUACA GUCUGAUG ACA gguc a
-augcaggaa gaga a u u AUU C - ugu au
Annotation confidence
Not enough data
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Genome context
LG10: 26292830-26292890 []
Clustered miRNAs
1 other miRNA is < 10 kb from loc-mir-199-1
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature loc-miR-199-5p
| Accession | MIMAT0070359 |
| Description | Lepisosteus oculatus loc-miR-199-5p mature miRNA |
| Sequence | 31 - CCCAGUGUUCAGACUACCUGUUC - 53 |
| Evidence | not_experimental |
Mature loc-miR-199-3p
| Accession | MIMAT0070360 |
| Description | Lepisosteus oculatus loc-miR-199-3p mature miRNA |
| Sequence | 70 - ACAGUAGUCUGCACAUUGGUUA - 91 |
| Evidence | not_experimental |
References
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