Stem-loop loc-mir-196-1

Accession

MI0045844

Description

Lepisosteus oculatus loc-mir-196-1 precursor miRNA

Sequence

uaacggcgcuaaguggacugucgagugguuUAGGUAGUUUCAUGUUGUUGGGcuccaauucguguucCUGCAACACGAAGCUGCCUUAAucgccccaguuaaagucgucgcagauccga
...(((((((.....(((((..(.((((((.((((((((((.((((((.((((.(......).).))).)))))).)))))))))).))))))).)))))..)).))))).........

Structure

------uaa     -  aagug     uc a      U          A      U   - u ca 
         cggcg cu     gacug  g gugguu AGGUAGUUUC UGUUGU GGG c c  a
         ||||| ||     |||||  | |||||| |||||||||| |||||| ||| | |   
         gcugc ga     uugac  c cgcuAA UCCGUCGAAG ACAACG Ccu g g  u
agccuagac     u  ---aa     -c -      U          C      U   u u cu 

Annotation confidence Not enough data

Genome context

LG11: 41141719-41141777 []

Mature loc-miR-196-5p

• Accession: MIMAT0070361
• Description: Lepisosteus oculatus loc-miR-196-5p mature miRNA
• Sequence: 31 - UAGGUAGUUUCAUGUUGUUGGG - 52
• Evidence: not_experimental

Mature loc-miR-196-1-3p

• Accession: MIMAT0070363
• Description: Lepisosteus oculatus loc-miR-196-1-3p mature miRNA
• Sequence: 68 - CUGCAACACGAAGCUGCCUUAA - 89
• Evidence: not_experimental

References