miRBase entry: loc-mir-462

Stem-loop loc-mir-462


Accession
MI0045851
Description
Lepisosteus oculatus loc-mir-462 precursor miRNA


Sequence


acgucccgaugaugucagcgugcgggucggUAACGGAACCCAUAAUGCAGCUGuuaccgagacgacccaGCUGAUUGCGGGUUCCGUACCcacucccacgccauggcaacgggcaacccc
..(.((((....((((((((((.((((.((((.((((((((.((((.((((((....((...))...)))))))))).)))))))))))).)))).)))))..))))).)))))......

Structure
----ac u    auga     --     c    c    A        A    G      uuac  a 
      g cccg    uguca  gcgug gggu ggUA CGGAACCC UAAU CAGCUG    cg  
      | ||||    |||||  ||||| |||| |||| |||||||| |||| ||||||    || g
      c gggc    acggu  cgcac cuca CCAU GCCUUGGG GUUA GUCGac    gc  
ccccaa -    ---a     ac     c    c    -        C    -      -cca  a 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
LG5: 50274331-50274390 []
Clustered miRNAs
1 other miRNA is < 10 kb from loc-mir-462
Name Accession Chromosome Start End Strand Confidence




Database links

Mature loc-miR-462-5p

Accession MIMAT0070376
Description Lepisosteus oculatus loc-miR-462-5p mature miRNA
Sequence 31 - UAACGGAACCCAUAAUGCAGCUG - 53
Evidence not_experimental

Mature loc-miR-462-3p

Accession MIMAT0070377
Description Lepisosteus oculatus loc-miR-462-3p mature miRNA
Sequence 70 - GCUGAUUGCGGGUUCCGUACC - 90
Evidence not_experimental

References