miRBase entry: loc-mir-181a-2

Stem-loop loc-mir-181a-2


Accession
MI0045859
Description
Lepisosteus oculatus loc-mir-181a-2 precursor miRNA


Sequence


caagguaguguuuuccaggugccuucggugAACAUUCAACGCUGUCGGUGAGUuugagcuucuaacagaaaCCAUCGACCGUUGACUGUACCcugaggcguacugcucucaucaccacgcaa
...(((.(((.....(((.((((((.((.(.(((.((((((..(((((((.((((.............))))))))))))))))).))).))).))))))..)))....))).)))......

Structure
---caa   a   uuuuc   -g      c  u A   U      CU       A    gagcu 
      ggu gug     cag  ugccuu gg g ACA UCAACG  GUCGGUG GUuu     u
      ||| |||     |||  |||||| || | ||| ||||||  ||||||| ||||     c
      cca uac     guc  gcggag cC C UGU AGUUGC  CAGCUAC Caaa     u
aacgca   c   -ucuc   au      u  - A   C      --       -    gacaa 


Annotation confidence Not enough data
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Genome context
LG21: 12499642-12499703 []
Clustered miRNAs
1 other miRNA is < 10 kb from loc-mir-181a-2
Name Accession Chromosome Start End Strand Confidence




Database links

Mature loc-miR-181a-5p

Accession MIMAT0070389
Description Lepisosteus oculatus loc-miR-181a-5p mature miRNA
Sequence 31 - AACAUUCAACGCUGUCGGUGAGU - 53
Evidence not_experimental

Mature loc-miR-181a-2-3p

Accession MIMAT0070391
Description Lepisosteus oculatus loc-miR-181a-2-3p mature miRNA
Sequence 72 - CCAUCGACCGUUGACUGUACC - 92
Evidence not_experimental

References