Accession
MI0045890
Description
Lepisosteus oculatus
loc-mir-130c precursor miRNA
Sequence
cagcggacggaaucgagcguguugucugagACUCUUUCCCUGUUGCACUACUgugacagcuacagcuagCAGUGCAAUAACGAAAGGGCGUcagacacacggcuaucuccucccccgagcc
....(((.(((....(((((((.((((((..(((((((..(((((((((.(((((.....))))).....)))))))))..)))))))..)))))))))).)))...))))))........
....(((.(((....(((((((.((((((..(((((((..(((((((((.(((((.....))))).....)))))))))..)))))))..)))))))))).)))...))))))........
Structure
----cagc c aucg - u gA CC ----A a
gga gga agc gugu gucuga CUCUUUC UGUUGCACU CUgug c
||| ||| ||| |||| |||||| ||||||| ||||||||| ||||| a
ccu ccu ucg caca cagacU GGGAAAG AUAACGUGA gacau g
ccgagccc - -cua g - GC CA Cgauc c
Annotation confidence
Not enough data
Do you think this miRNA is real?
Genome context
LG20: 1575811-1575871 [+]
Clustered miRNAs
3 other miRNAs are < 10 kb from loc-mir-130c
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature loc-miR-130c-5p
| Accession | MIMAT0070447 |
| Description | Lepisosteus oculatus loc-miR-130c-5p mature miRNA |
| Sequence | 31 - ACUCUUUCCCUGUUGCACUACU - 52 |
| Evidence | not_experimental |
Mature loc-miR-130c-3p
| Accession | MIMAT0070448 |
| Description | Lepisosteus oculatus loc-miR-130c-3p mature miRNA |
| Sequence | 70 - CAGUGCAAUAACGAAAGGGCGU - 91 |
| Evidence | not_experimental |
References
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