miRBase entry: loc-mir-130b

Stem-loop loc-mir-130b


Accession
MI0045894
Description
Lepisosteus oculatus loc-mir-130b precursor miRNA


Sequence


ccugcauccagacugucuugucuguccaguGCCCCUUUUAUGUUGUACUACUggugacccuguaaagaaagCAGUGCAAUGUUAAAAGGGCAUuggccagggauugugcccgagcuggucccu
........(((((......))))).(((((((((.(((.((((((((((.((.................)).)))))))))).))).)))))))))..((((((((.((....))))))))))

Structure
--ccugcauccagacugucuugucugu         C   U          A  ggugacc 
                           ccaguGCCC UUU AUGUUGUACU CU       c
                           ||||||||| ||| |||||||||| ||       u
                           gguUACGGG AAA UGUAACGUGA ga       g
ucccuggucgagcccguguuagggacc         A   U          C  aagaaau 


Annotation confidence Not enough data
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Genome context
LG22: 410006-410068 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from loc-mir-130b
Name Accession Chromosome Start End Strand Confidence




Database links

Mature loc-miR-130b-5p

Accession MIMAT0070455
Description Lepisosteus oculatus loc-miR-130b-5p mature miRNA
Sequence 31 - GCCCCUUUUAUGUUGUACUACU - 52
Evidence not_experimental

Mature loc-miR-130b-3p

Accession MIMAT0070456
Description Lepisosteus oculatus loc-miR-130b-3p mature miRNA
Sequence 72 - CAGUGCAAUGUUAAAAGGGCAU - 93
Evidence not_experimental

References