Accession
MI0045895
Description
Lepisosteus oculatus
loc-mir-130a precursor miRNA
Sequence
ugacauggcuuuacuguuuuguuguccacgGCUCUUUUUCUGUUGUACUACUgugaaaaacagaugagCAGUGCAAUAUUAAAAGGGCAUuggcugacagaaaagcgacccccccuuucc
.......(((((.(((((.....(.(((..((((((((..(((((((((.((((.....))))......)))))))))..))))))))..)))).))))).)))))..............
.......(((((.(((((.....(.(((..((((((((..(((((((((.((((.....))))......)))))))))..))))))))..)))).))))).)))))..............
Structure
-------ugacaug a uuguu u cg UC -----A g
gcuuu cuguu g cca GCUCUUUU UGUUGUACU CUgu a
||||| ||||| | ||| |||||||| ||||||||| |||| a
cgaaa gacag c ggu CGGGAAAA AUAACGUGA gaca a
ccuuucccccccag a ----u - UA UU Cgagua a
Annotation confidence
Not enough data
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Genome context
LG20: 1567777-1567836 [+]
Clustered miRNAs
3 other miRNAs are < 10 kb from loc-mir-130a
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature loc-miR-130a-5p
| Accession | MIMAT0070457 |
| Description | Lepisosteus oculatus loc-miR-130a-5p mature miRNA |
| Sequence | 31 - GCUCUUUUUCUGUUGUACUACU - 52 |
| Evidence | not_experimental |
Mature loc-miR-130a-3p
| Accession | MIMAT0070458 |
| Description | Lepisosteus oculatus loc-miR-130a-3p mature miRNA |
| Sequence | 69 - CAGUGCAAUAUUAAAAGGGCAU - 90 |
| Evidence | not_experimental |
References
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