Accession
MI0045930
Description
Lepisosteus oculatus
loc-mir-30d-1 precursor miRNA
Sequence
uuucucacaagagcuccgagaugaaggcagUGUAAACAUCCUACACUCUCAGCUuuggcaaguaaagaggCUGGGAGAGGGGUGUUUGCGCUcucuagcucggaaaagcaacgucugaggaa
.((((((.....((((((((....(((.((((((((((((((...(((((((((((..........))))))))))).)))))))))))))).)))..))))))...))......)))))).
.((((((.....((((((((....(((.((((((((((((((...(((((((((((..........))))))))))).)))))))))))))).)))..))))))...))......)))))).
Structure
u -caaga --- auga c ACA ggca uucuca gc uccgag agg agUGUAAACAUCCU CUCUCAGCUuu a |||||| || |||||| ||| |||||||||||||| ||||||||||| aggagu cg aggcuc ucu UCGCGUUUGUGGGG GAGGGUCggag g a cugcaa aaa --ga c --A aaau
Annotation confidence
Not enough data
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Genome context
LG16: 10640237-10640298 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from loc-mir-30d-1
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature loc-miR-30d-5p
| Accession | MIMAT0070514 |
| Description | Lepisosteus oculatus loc-miR-30d-5p mature miRNA |
| Sequence | 31 - UGUAAACAUCCUACACUCUCAGCU - 54 |
| Evidence | not_experimental |
Mature loc-miR-30d-1-3p
| Accession | MIMAT0070516 |
| Description | Lepisosteus oculatus loc-miR-30d-1-3p mature miRNA |
| Sequence | 71 - CUGGGAGAGGGGUGUUUGCGCU - 92 |
| Evidence | not_experimental |
References
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