Stem-loop loc-mir-30c

Accession

MI0045931

Description

Lepisosteus oculatus loc-mir-30c precursor miRNA

Sequence

gaauugcaggugaauccaagucauaguuagUGUAAACAUCCUACACUCAGCUguaacuucaaaguaaaggCUGGGAGAAGGGUGUUUACUUUgacuaguuuggaagaacguuuaugcagcaa
...(((((.((...((((((.(.(((((((.(((((((((((.(.(((((((...(((....)))...))))))).).))))))))))).))))))))))))))...)).)....))))...

Structure

gaa    ---- g  gaa      u a       U           A A       gua   u 
   uugc    a gu   uccaag c uaguuag GUAAACAUCCU C CUCAGCU   acu c
   ||||    | ||   |||||| | ||||||| ||||||||||| | |||||||   |||  
   gacg    u ca   agguuu g aucagUU CAUUUGUGGGA G GGGUCgg   uga a
aac    uauu g  aga      - -       U           A A       aaa   a 

Annotation confidence Not enough data

Genome context

LG11: 8164573-8164634 []

Clustered miRNAs

1 other miRNA is < 10 kb from loc-mir-30c

Mature loc-miR-30c-5p

• Accession: MIMAT0070517
• Description: Lepisosteus oculatus loc-miR-30c-5p mature miRNA
• Sequence: 31 - UGUAAACAUCCUACACUCAGCU - 52
• Evidence: not_experimental

Mature loc-miR-30c-3p

• Accession: MIMAT0070518
• Description: Lepisosteus oculatus loc-miR-30c-3p mature miRNA
• Sequence: 71 - CUGGGAGAAGGGUGUUUACUUU - 92
• Evidence: not_experimental

References