miRBase entry: loc-mir-29b-3

Stem-loop loc-mir-29b-3


Accession
MI0045935
Description
Lepisosteus oculatus loc-mir-29b-3 precursor miRNA


Sequence


ccuucucccugaggccucuuaccaaggcugACCGAUUUCUUUUGGUGUUCAGAgucaucuucaguuucUAGCACCAUUUGAAAUCGGUUAcaauguaggaggaagaucagcugaacacuu
..(((...((((..((((((((....(.(((((((((((...(((((((.((((...........)))))))))))...))))))))))))...))))))))....))))..))).....

Structure
---cc   ucc    --gg        caag c           UUU       C    ucau 
     uuc   cuga    ccucuuac    g ugACCGAUUUC   UGGUGUU AGAg    c
     |||   ||||    ||||||||    | |||||||||||   ||||||| ||||    u
     aag   gacu    ggaggaug    c AUUGGCUAAAG   ACCACGA Ucuu    u
uucac   -uc    agaa        -uaa -           UUU       -    ugac 


Annotation confidence Not enough data
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Genome context
LG3: 30969985-30970044 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from loc-mir-29b-3
Name Accession Chromosome Start End Strand Confidence




Database links

Mature loc-miR-29b-3-5p

Accession MIMAT0070524
Description Lepisosteus oculatus loc-miR-29b-3-5p mature miRNA
Sequence 31 - ACCGAUUUCUUUUGGUGUUCAGA - 53
Evidence not_experimental

Mature loc-miR-29b-3p

Accession MIMAT0070523
Description Lepisosteus oculatus loc-miR-29b-3p mature miRNA
Sequence 69 - UAGCACCAUUUGAAAUCGGUUA - 90
Evidence not_experimental

References