Accession
MI0045940
Description
Lepisosteus oculatus
loc-mir-27d precursor miRNA
Sequence
uccuguagcccagucccuuucugaaggcacAGAGCUUAGCUAAUUGGCGAGCAuuguuccuaucaauauauugUUCACAGUGGCUAAGUUCAGUgcccgaagugaaacaguggaugggaugugc
........((((.((((((((....(((((.(((((((((((.(((..(((((.(((..........))).))))).)))))))))))))).)))))......)))..)).)))))))......
........((((.((((((((....(((((.(((((((((((.(((..(((((.(((..........))).))))).)))))))))))))).)))))......)))..)).)))))))......
Structure
uccuguag g - -- --ugaa A A GC u uccu
ccca ucc cu uuc ggcac GAGCUUAGCUA UUG GAGCA ugu a
|||| ||| || ||| ||||| ||||||||||| ||| ||||| |||
gggu agg ga aag ccgUG CUUGAAUCGGU GAC CUUgu aua u
--cgugua - u ca ugaagc A - -A u uaac
Annotation confidence
Not enough data
Do you think this miRNA is real?
Genome context
LG19: 5780510-5780573 [+]
Clustered miRNAs
2 other miRNAs are < 10 kb from loc-mir-27d
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature loc-miR-27d-5p
| Accession | MIMAT0070531 |
| Description | Lepisosteus oculatus loc-miR-27d-5p mature miRNA |
| Sequence | 31 - AGAGCUUAGCUAAUUGGCGAGCA - 53 |
| Evidence | not_experimental |
Mature loc-miR-27d-3p
| Accession | MIMAT0070530 |
| Description | Lepisosteus oculatus loc-miR-27d-3p mature miRNA |
| Sequence | 74 - UUCACAGUGGCUAAGUUCAGU - 94 |
| Evidence | not_experimental |
References
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