Accession
MI0045942
Description
Lepisosteus oculatus
loc-mir-27b precursor miRNA
Sequence
gcugagaaaaugaccucuccaucaaggugcAGAGCUUAGCUGAUUGGUGAACAgugauugauuacuucuuugUUCACAGUGGCUAAGUUCUGCaccugaagagagggugagaauuaagccagg
(((..........((((((..(((.((((((((((((((((.((((.(((((((.((.........)).)))))))))))))))))))))))))))))).))))))..........)))....
(((..........((((((..(((.((((((((((((((((.((((.(((((((.((.........)).)))))))))))))))))))))))))))))).))))))..........)))....
Structure
---- gagaaaauga ca a G G u uug
gcu ccucuc uca ggugcAGAGCUUAGCU AUUG UGAACAg ga a
||| |||||| ||| |||||||||||||||| |||| ||||||| || u
cga ggagag agu ccaCGUCUUGAAUCGG UGAC ACUUguu cu u
ggac auuaagagug -a - - - u uca
Annotation confidence
Not enough data
Do you think this miRNA is real?
Genome context
LG2: 32741690-32741752 []
Clustered miRNAs
2 other miRNAs are < 10 kb from loc-mir-27b
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature loc-miR-27b-5p
| Accession | MIMAT0070535 |
| Description | Lepisosteus oculatus loc-miR-27b-5p mature miRNA |
| Sequence | 31 - AGAGCUUAGCUGAUUGGUGAACA - 53 |
| Evidence | not_experimental |
Mature loc-miR-27b-3p
| Accession | MIMAT0070534 |
| Description | Lepisosteus oculatus loc-miR-27b-3p mature miRNA |
| Sequence | 73 - UUCACAGUGGCUAAGUUCUGC - 93 |
| Evidence | not_experimental |
References
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