Stem-loop loc-mir-24-1

Accession

MI0045950

Description

Lepisosteus oculatus loc-mir-24-1 precursor miRNA

Sequence

gaggaagcaagcaaaugggcuccaucuccaGUGCCUACUGAGCUGAUUACAGUugauuuauugagcacUGGCUCAGUUCAGCAGGAACCGgaguucugccucuuaauacacggaucccaa
(.(((..(........((((.....((((.((.(((.(((((((((...((((.(.((....)).)))))..))))))))).))).)).))))....))))..........)..))))..

Structure

-- a   ag --aagcaaau    uccau    a  G   A         UUA    u a  u 
  g gga  c          gggc     cucc GU CCU CUGAGCUGA   CAGU g uu a
  | |||  |          ||||     |||| || ||| |||||||||   |||| | ||  
  c ccu  g          uccg     gagG CA GGA GACUUGACU   GUca c ag u
aa -   ag cacauaauuc    -ucuu    C  A   C         -CG    - g  u 

Annotation confidence Not enough data

Genome context

LG10: 2473205-2473264 []

Clustered miRNAs

3 other miRNAs are < 10 kb from loc-mir-24-1

Mature loc-miR-24-1-5p

• Accession: MIMAT0070547
• Description: Lepisosteus oculatus loc-miR-24-1-5p mature miRNA
• Sequence: 31 - GUGCCUACUGAGCUGAUUACAGU - 53
• Evidence: not_experimental

Mature loc-miR-24-1-3p

• Accession: MIMAT0070546
• Description: Lepisosteus oculatus loc-miR-24-1-3p mature miRNA
• Sequence: 69 - UGGCUCAGUUCAGCAGGAACCG - 90
• Evidence: not_experimental

References