Accession
MI0045961
Description
Lepisosteus oculatus
loc-mir-20e precursor miRNA
Sequence
guggcuggaggccaugugucugggcgguucCAAAGUGCUCACAGUGCAGGUAGuguugccagaucuACUGCAGUAUGGGCACUUCUAGuagcgccggacuccucuccuguccucccucu
..(((.(((((......((((((((.......(((((((((.(.(((((.(((.(((....))))))))))).).)))))))))......)).))))))...))))).)))........
..(((.(((((......((((((((.......(((((((((.(.(((((.(((.(((....))))))))))).).)))))))))......)).))))))...))))).)))........
Structure
------gu u ccaugu - gguucCA C G G u g
ggc ggagg gucugg gc AAGUGCUCA A UGCAG UAG guu c
||| ||||| |||||| || ||||||||| | ||||| ||| |||
cug ccucu caggcc cg UUCACGGGU U ACGUC Auc uag c
ucucccuc u ---ccu g -auGAUC A G - - a
Annotation confidence
Not enough data
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Genome context
LG7: 45790439-45790497 []
Clustered miRNAs
3 other miRNAs are < 10 kb from loc-mir-20e
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature loc-miR-20e-5p
| Accession | MIMAT0070567 |
| Description | Lepisosteus oculatus loc-miR-20e-5p mature miRNA |
| Sequence | 31 - CAAAGUGCUCACAGUGCAGGUAG - 53 |
| Evidence | not_experimental |
Mature loc-miR-20e-3p
| Accession | MIMAT0070568 |
| Description | Lepisosteus oculatus loc-miR-20e-3p mature miRNA |
| Sequence | 67 - ACUGCAGUAUGGGCACUUCUAG - 88 |
| Evidence | not_experimental |
References
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