Accession
MI0045962
Description
Lepisosteus oculatus
loc-mir-20d precursor miRNA
Sequence
gauaugugaugcgacgaguuucagcaguauUAAAGUGCUUAUAGUGCAGGUAGuuuuuagugaccUACUGCAGUAUGAGCACUUGAAGUacuucuagcuaagugcgucggacuuaaauu
....(.(((((((...((((..((.((((((.(((((((((((.(((((...(((......)))...))))).)))))))))))..)))))).))))))...))))))).)........
....(.(((((((...((((..((.((((((.(((((((((((.(((((...(((......)))...))))).)))))))))))..)))))).))))))...))))))).)........
Structure
----gaua g acg uc c -A G GUA uu
u ugaugcg aguu ag aguauU AAGUGCUUAUA UGCAG Guu u
| ||||||| |||| || |||||| ||||||||||| ||||| |||
a gcugcgu ucga uc ucaUGA UUCACGAGUAU ACGUC cag a
uuaaauuc g gaa -- u AG G AUc ug
Annotation confidence
Not enough data
Do you think this miRNA is real?
Genome context
LG17: 12376500-12376558 [+]
Clustered miRNAs
5 other miRNAs are < 10 kb from loc-mir-20d
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature loc-miR-20d-5p
| Accession | MIMAT0070569 |
| Description | Lepisosteus oculatus loc-miR-20d-5p mature miRNA |
| Sequence | 31 - UAAAGUGCUUAUAGUGCAGGUAG - 53 |
| Evidence | not_experimental |
Mature loc-miR-20d-3p
| Accession | MIMAT0070570 |
| Description | Lepisosteus oculatus loc-miR-20d-3p mature miRNA |
| Sequence | 66 - UACUGCAGUAUGAGCACUUGAAGU - 89 |
| Evidence | not_experimental |
References
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