Stem-loop loc-mir-18a

Accession

MI0045964

Description

Lepisosteus oculatus loc-mir-18a precursor miRNA

Sequence

gugagugcuggcuuguccuacugcuugugcUAAGGUGCAUCUAGUGCAGAUAGugaaguagauuagcaccuACUGCCCUAAGUGCUCCUUCUGGCauaaggggcugugaucugcaucuggcauga
....((((((((..((((..((.((((((((((((.((((.(((.((((.(((((..(.....)..)).))))))).))).)))).)))..))))))))).))..).)))..))...))))))..

Structure

guga      ---  uu   - ua  g         --   U    C   U    A   -  aa u 
    gugcug   gc  guc c  cu cuugugcUA  AGG GCAU UAG GCAG UAG ug  g a
    ||||||   ||  ||| |  || |||||||||  ||| |||| ||| |||| ||| ||  | g
    uacggu   cg  uag g  gg gaauaCGGU  UCC CGUG AUC CGUC Auc ac  u a
--ag      cua  uc   u uc  g         CU   U    A   C    -   c  ga u 

Annotation confidence Not enough data

Genome context

LG17: 12376145-12376209 [+]

Clustered miRNAs

5 other miRNAs are < 10 kb from loc-mir-18a

Mature loc-miR-18a-5p

• Accession: MIMAT0070573
• Description: Lepisosteus oculatus loc-miR-18a-5p mature miRNA
• Sequence: 31 - UAAGGUGCAUCUAGUGCAGAUAG - 53
• Evidence: not_experimental

Mature loc-miR-18a-3p

• Accession: MIMAT0070574
• Description: Lepisosteus oculatus loc-miR-18a-3p mature miRNA
• Sequence: 72 - ACUGCCCUAAGUGCUCCUUCUGGC - 95
• Evidence: not_experimental

References