Accession
MI0045965
Description
Lepisosteus oculatus
loc-mir-20c precursor miRNA
Sequence
gagcgcuggccugagggguccucgcugugcUAAAGUGCUUACAGUGCAGGUAGuuccucuguucagccuACCGCAGUGUGAGCACUUCUUGcacagcagggccaagacgcagguucgcgcgg
..((((.((((((...((((((.(((((((..(((((((((((.(((.(((((...((......)).)))))))).)))))))))))...)))))))))))))......)))))).))))..
..((((.((((((...((((((.(((((((..(((((((((((.(((.(((((...((......)).)))))))).)))))))))))...)))))))))))))......)))))).))))..
Structure
ga u ---agg c -UA G A uuc cu gcgc ggccug gguccu gcugugc AAGUGCUUACA UGC GGUAG cu g |||| |||||| |||||| ||||||| ||||||||||| ||| ||||| || cgcg uuggac ccggga cgacacG UUCACGAGUGU ACG CCAuc ga u gg c gcagaa - UUC G - --c cu
Annotation confidence
Not enough data
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Genome context
LG2: 57218139-57218200 []
Clustered miRNAs
3 other miRNAs are < 10 kb from loc-mir-20c
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature loc-miR-20c-5p
| Accession | MIMAT0070575 |
| Description | Lepisosteus oculatus loc-miR-20c-5p mature miRNA |
| Sequence | 31 - UAAAGUGCUUACAGUGCAGGUAG - 53 |
| Evidence | not_experimental |
Mature loc-miR-20c-3p
| Accession | MIMAT0070576 |
| Description | Lepisosteus oculatus loc-miR-20c-3p mature miRNA |
| Sequence | 70 - ACCGCAGUGUGAGCACUUCUUG - 91 |
| Evidence | not_experimental |
References
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