Stem-loop loc-mir-20a

Accession

MI0045967

Description

Lepisosteus oculatus loc-mir-20a precursor miRNA

Sequence

agaagaauguugcuuaagucacgguaacguCAAAGUGCUUACAGUGCAGGUAGuacuaugggauaucuACUGCAGUGGAGGCACUUCUAGcauuacagugaccaaagcaucaagcuaucac
.((((..((.(((((..(((((.((((.((..(((((((..((.(((((.(((.............)))))))).))..)))))))...)).)))).)))))..))))).))..)).))..

Structure

-a  -  aa  u     aa     g    c  -CA       UA  G     G   uacua 
  ga ag  ug ugcuu  gucac guaa gu   AAGUGCU  CA UGCAG UAG     u
  || ||  || |||||  ||||| |||| ||   |||||||  || ||||| |||     g
  cu uc  ac acgaa  cagug cauu cG   UUCACGG  GU ACGUC Auc     g
ca  a  ga  u     ac     a    a  AUC       AG  G     -   uauag 

Annotation confidence Not enough data

Genome context

LG17: 12376014-12376074 [+]

Clustered miRNAs

5 other miRNAs are < 10 kb from loc-mir-20a

Mature loc-miR-20a-5p

• Accession: MIMAT0070579
• Description: Lepisosteus oculatus loc-miR-20a-5p mature miRNA
• Sequence: 31 - CAAAGUGCUUACAGUGCAGGUAG - 53
• Evidence: not_experimental

Mature loc-miR-20a-3p

• Accession: MIMAT0070580
• Description: Lepisosteus oculatus loc-miR-20a-3p mature miRNA
• Sequence: 69 - ACUGCAGUGGAGGCACUUCUAG - 90
• Evidence: not_experimental

References