Stem-loop loc-mir-16c

Accession

MI0045969

Description

Lepisosteus oculatus loc-mir-16c precursor miRNA

Sequence

ccgcagucccgcgcgucgcuggccgugcugUAGCAGCACGUACAUACUGGAGuggcgccgauuggggucuCCAGUGUUGGCGGAUCUGCUUCAguaaggccagcgcggaccauggaccuggau
(((..((((.(..((.((((((((.(((((.(((((..(((..(((((((((..((.((....)).)))))))))))..)))...))))).))))).))))))))))..)...)))).)))..

Structure

--   ca    --c cg  u        g     U     -CA   AC         ug  g  g 
  ccg  gucc   g  cg cgcuggcc ugcug AGCAG   CGU  AUACUGGAG  gc cc a
  |||  ||||   |  || |||||||| ||||| |||||   |||  |||||||||  || ||  
  ggu  cagg   c  gc gcgaccgg augAC UCGUC   GCG  UGUGACCuc  ug gg u
ua   -c    uac ag  -        a     U     UAG   GU         --  g  u 

Annotation confidence Not enough data

Genome context

LG7: 45848046-45848108 []

Clustered miRNAs

1 other miRNA is < 10 kb from loc-mir-16c

Mature loc-miR-16c-5p

• Accession: MIMAT0070583
• Description: Lepisosteus oculatus loc-miR-16c-5p mature miRNA
• Sequence: 31 - UAGCAGCACGUACAUACUGGAG - 52
• Evidence: not_experimental

Mature loc-miR-16c-3p

• Accession: MIMAT0070584
• Description: Lepisosteus oculatus loc-miR-16c-3p mature miRNA
• Sequence: 71 - CCAGUGUUGGCGGAUCUGCUUCA - 93
• Evidence: not_experimental

References