Accession
MI0045971
Description
Lepisosteus oculatus
loc-mir-16a precursor miRNA
Sequence
agcauaacguuuauaauggcagccaugcuuUAGCAGCACGUAAAUAUUGGAGuuaaaccacuucauaucucuCCAGUAUUGAUCGUGCUGCUGAAguaagauuguucauuugucaucacgaagaa
.......(((....((((((((.(.(((((((((((((((..((((((((((..................))))))))))...))))))))))))))).).))).))))).......))).....
.......(((....((((((((.(.(((((((((((((((..((((((((((..................))))))))))...))))))))))))))).).))).))))).......))).....
Structure
agcauaa ---uuau - c a -UA uuaaacca
cgu aaugg cag c ugcuuUAGCAGCACG AAUAUUGGAG c
||| ||||| ||| | ||||||||||||||| ||||||||||
gca uuacu guu g augAAGUCGUCGUGC UUAUGACCuc u
--aagaa cuacugu u a a UAG ucuauacu
Annotation confidence
Not enough data
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Genome context
LG17: 24936650-24936714 []
Clustered miRNAs
1 other miRNA is < 10 kb from loc-mir-16a
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature loc-miR-16a-5p
| Accession | MIMAT0070587 |
| Description | Lepisosteus oculatus loc-miR-16a-5p mature miRNA |
| Sequence | 31 - UAGCAGCACGUAAAUAUUGGAG - 52 |
| Evidence | not_experimental |
Mature loc-miR-16a-3p
| Accession | MIMAT0070588 |
| Description | Lepisosteus oculatus loc-miR-16a-3p mature miRNA |
| Sequence | 73 - CCAGUAUUGAUCGUGCUGCUGAA - 95 |
| Evidence | not_experimental |
References
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